3/3/2023 0 Comments Cytoscape citation![]() ![]() This study therefore sought to see if it was possible to produce an easily updatable visual map of the research landscape of a research institute using relatively simple data analysis tools that do not require extensive computer expertise, based on publication records. Understanding the interactive organization of the research institute is therefore a more difficult task than simply evaluating individuals, but may allow an understanding of how inter-related individuals contribute to the total research output of an institute. The use of fractional paper counts serves to account for this by proportioning output amongst contributing authors. More importantly, research organizations (department, faculty or institute) are interactive organizations, and the researchers within the organization will be linked by internal collaboration and multiple authors may be present on multiple papers that contribute to the total institute output, in this regard the sum of all individual publications will be higher than the total institute output. Whichever method is used, the final result is normally a number that needs to be further interpreted in light of other factors such as the seniority of the researcher. These methods are primarily retrospective in methodology (4), and involve determination of output in terms of simple paper number counts, published pages, fractional paper counts (where author credit is assigned as a fraction of the total number of authors on a paper) or the use of bibliographic citation analysis either by direct citation counts, average citation counts or more recently by h factor analysis (5). There are several well reported methods of evaluation, all of which have their own particular advantages and disadvantages. Evaluation of the research productivity of the individual will have an element of benchmarking and fund or space allocation, but will additionally help determine personal researcher benefits such as salary increases and promotion (3). Within the University organization, evaluation of research productivity for departments, faculties and institutions may be used for benchmarking purposes, but may more frequently be used for the allocation of funds and/or space (2). At the University level, evaluation of research productivity is normally related to “benchmarking” and occurs at both the national and international levels (1). Available from: p=9938Įvaluation of research productivity, whether of the individual, the department, faculty or institute or of the University itself is an established part of research culture. A Simple Method to Map an Institutional Research landscape using Cytoscape. ![]() KEYWORDS: Citation analysis collaboration networking outputĭownload this article as: Copy the following to cite this article: In particular this system is adaptable to use without subscription to potentially expensive databases which may be unavailable to workers in smaller institutions or those in developing nations. The data can be easily updated and can provide a continual picture of the activity of a research institute or other organization. This study describes the application of a well established biological interaction program, Cytoscape, to allow visualization of the interaction of the individual researchers and show that by weighting the information with collaborative link strengths and output data or citation data, it is able to produce a picture of the ‘research landscape’ of an institution. While there are a number of methods to evaluate the contribution of individuals to the overall research productivity of an institute, these methods tend to be relatively static, and may fail to accurately represent the nature of the institution. Institute of Molecular Biosciences, Mahidol University, Salaya Campus, 25/25 Phuttamontol Sai 4, Salaya, Nakorn Pathom, Thailand 73170.ĪBSTRACT: Research institutions are organizations that are traditionally composed of a number of researchers either working independently or as part of small clusters (such as research groups) within the institute. A Simple Method to Map an Institutional Research landscape using Cytoscape ![]()
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